Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHK05235.1 | SHK36345.1 | SAMN04488087_0112 | SAMN04488087_0973 | Histone H1-like protein Hc1. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.482 |
| SHK05235.1 | SHK43449.1 | SAMN04488087_0112 | SAMN04488087_1074 | Histone H1-like protein Hc1. | Putative DNA-binding domain-containing protein. | 0.735 |
| SHK05235.1 | SHK46486.1 | SAMN04488087_0112 | SAMN04488087_1168 | Histone H1-like protein Hc1. | FlgD Ig-like domain-containing protein. | 0.493 |
| SHK05235.1 | SHK49928.1 | SAMN04488087_0112 | SAMN04488087_1287 | Histone H1-like protein Hc1. | Hypothetical protein. | 0.650 |
| SHK05235.1 | SHK49951.1 | SAMN04488087_0112 | SAMN04488087_1288 | Histone H1-like protein Hc1. | Helix-hairpin-helix motif-containing protein. | 0.593 |
| SHK05235.1 | SHK71346.1 | SAMN04488087_0112 | SAMN04488087_1813 | Histone H1-like protein Hc1. | Hypothetical protein. | 0.762 |
| SHK16774.1 | SHK49928.1 | SAMN04488087_0518 | SAMN04488087_1287 | Type IV pilus assembly protein PilC. | Hypothetical protein. | 0.635 |
| SHK16774.1 | SHK49951.1 | SAMN04488087_0518 | SAMN04488087_1288 | Type IV pilus assembly protein PilC. | Helix-hairpin-helix motif-containing protein. | 0.556 |
| SHK16774.1 | SHK88063.1 | SAMN04488087_0518 | SAMN04488087_2217 | Type IV pilus assembly protein PilC. | Competence protein ComEC. | 0.803 |
| SHK36345.1 | SHK05235.1 | SAMN04488087_0973 | SAMN04488087_0112 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Histone H1-like protein Hc1. | 0.482 |
| SHK36345.1 | SHK46486.1 | SAMN04488087_0973 | SAMN04488087_1168 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | FlgD Ig-like domain-containing protein. | 0.726 |
| SHK36345.1 | SHK49928.1 | SAMN04488087_0973 | SAMN04488087_1287 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Hypothetical protein. | 0.709 |
| SHK36345.1 | SHK49951.1 | SAMN04488087_0973 | SAMN04488087_1288 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Helix-hairpin-helix motif-containing protein. | 0.650 |
| SHK36345.1 | SHK71346.1 | SAMN04488087_0973 | SAMN04488087_1813 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Hypothetical protein. | 0.453 |
| SHK43449.1 | SHK05235.1 | SAMN04488087_1074 | SAMN04488087_0112 | Putative DNA-binding domain-containing protein. | Histone H1-like protein Hc1. | 0.735 |
| SHK43449.1 | SHK49928.1 | SAMN04488087_1074 | SAMN04488087_1287 | Putative DNA-binding domain-containing protein. | Hypothetical protein. | 0.512 |
| SHK43449.1 | SHK49951.1 | SAMN04488087_1074 | SAMN04488087_1288 | Putative DNA-binding domain-containing protein. | Helix-hairpin-helix motif-containing protein. | 0.580 |
| SHK43449.1 | SHK71346.1 | SAMN04488087_1074 | SAMN04488087_1813 | Putative DNA-binding domain-containing protein. | Hypothetical protein. | 0.766 |
| SHK46486.1 | SHK05235.1 | SAMN04488087_1168 | SAMN04488087_0112 | FlgD Ig-like domain-containing protein. | Histone H1-like protein Hc1. | 0.493 |
| SHK46486.1 | SHK36345.1 | SAMN04488087_1168 | SAMN04488087_0973 | FlgD Ig-like domain-containing protein. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.726 |
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