STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK50363.1Por secretion system C-terminal sorting domain-containing protein. (525 aa)    
Predicted Functional Partners:
SHK50233.1
Hypothetical protein.
 
     0.897
SHK50285.1
Outer membrane receptor proteins, mostly Fe transport.
 
     0.894
SHK50261.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.846
SHK79278.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.788
SHK08012.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.787
SHK76995.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.774
SHK35147.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.773
SHK34778.1
Hypothetical protein.
  
     0.771
SHK38582.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.771
SHK46096.1
Hypothetical protein.
  
     0.771
Your Current Organism:
Rhodothermus profundi
NCBI taxonomy Id: 633813
Other names: DSM 22212, JCM 15944, R. profundi, Rhodothermus profundi Marteinsson et al. 2010, Rhodothermus sp. PRI 2902, strain PRI 2902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.