Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK04200.1 | SHK05193.1 | SAMN04488087_0074 | SAMN04488087_0111 | Family of unknown function. | Acetylglutamate kinase. | 0.734 |
SHK04200.1 | SHK05324.1 | SAMN04488087_0074 | SAMN04488087_0115 | Family of unknown function. | Protein of unknown function. | 0.771 |
SHK04200.1 | SHK13161.1 | SAMN04488087_0074 | SAMN04488087_0393 | Family of unknown function. | Protein TonB. | 0.689 |
SHK04200.1 | SHK58360.1 | SAMN04488087_0074 | SAMN04488087_1462 | Family of unknown function. | Outer membrane protein assembly factor BamA. | 0.794 |
SHK04200.1 | SHK72002.1 | SAMN04488087_0074 | SAMN04488087_1835 | Family of unknown function. | Surface antigen. | 0.615 |
SHK04200.1 | SHK78016.1 | SAMN04488087_0074 | SAMN04488087_1949 | Family of unknown function. | Long-chain fatty acid transport protein. | 0.710 |
SHK04200.1 | SHK91449.1 | SAMN04488087_0074 | SAMN04488087_2278 | Family of unknown function. | TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region. | 0.469 |
SHK04200.1 | SHK96953.1 | SAMN04488087_0074 | SAMN04488087_2424 | Family of unknown function. | TonB-linked outer membrane protein, SusC/RagA family. | 0.728 |
SHK04200.1 | SHL07955.1 | SAMN04488087_0074 | SAMN04488087_2659 | Family of unknown function. | Ig-like domain-containing protein. | 0.648 |
SHK05193.1 | SHK04200.1 | SAMN04488087_0111 | SAMN04488087_0074 | Acetylglutamate kinase. | Family of unknown function. | 0.734 |
SHK05193.1 | SHK05324.1 | SAMN04488087_0111 | SAMN04488087_0115 | Acetylglutamate kinase. | Protein of unknown function. | 0.700 |
SHK05193.1 | SHK13161.1 | SAMN04488087_0111 | SAMN04488087_0393 | Acetylglutamate kinase. | Protein TonB. | 0.537 |
SHK05193.1 | SHK58360.1 | SAMN04488087_0111 | SAMN04488087_1462 | Acetylglutamate kinase. | Outer membrane protein assembly factor BamA. | 0.470 |
SHK05193.1 | SHK72002.1 | SAMN04488087_0111 | SAMN04488087_1835 | Acetylglutamate kinase. | Surface antigen. | 0.686 |
SHK05193.1 | SHK78016.1 | SAMN04488087_0111 | SAMN04488087_1949 | Acetylglutamate kinase. | Long-chain fatty acid transport protein. | 0.488 |
SHK05193.1 | SHK96953.1 | SAMN04488087_0111 | SAMN04488087_2424 | Acetylglutamate kinase. | TonB-linked outer membrane protein, SusC/RagA family. | 0.670 |
SHK05193.1 | SHL07955.1 | SAMN04488087_0111 | SAMN04488087_2659 | Acetylglutamate kinase. | Ig-like domain-containing protein. | 0.417 |
SHK05324.1 | SHK04200.1 | SAMN04488087_0115 | SAMN04488087_0074 | Protein of unknown function. | Family of unknown function. | 0.771 |
SHK05324.1 | SHK05193.1 | SAMN04488087_0115 | SAMN04488087_0111 | Protein of unknown function. | Acetylglutamate kinase. | 0.700 |
SHK05324.1 | SHK13161.1 | SAMN04488087_0115 | SAMN04488087_0393 | Protein of unknown function. | Protein TonB. | 0.487 |
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