STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL02475.1L-lactate dehydrogenase complex protein LldF. (462 aa)    
Predicted Functional Partners:
SHL02445.1
L-lactate dehydrogenase complex protein LldE.
 0.998
SHL02506.1
L-lactate dehydrogenase complex protein LldG.
 
 
 0.995
SHK72532.1
FAD/FMN-containing dehydrogenase.
 
 0.937
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.910
SHK84904.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.877
SHK32888.1
NAD(P)H-flavin reductase.
  
  0.779
SHK32948.1
4Fe-4S dicluster domain-containing protein.
  
 0.776
SHK56329.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.760
SHK59926.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
   
 
  0.728
SHK43044.1
Glutamate synthase (NADH) large subunit.
    
  0.725
Your Current Organism:
Rhodothermus profundi
NCBI taxonomy Id: 633813
Other names: DSM 22212, JCM 15944, R. profundi, Rhodothermus profundi Marteinsson et al. 2010, Rhodothermus sp. PRI 2902, strain PRI 2902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.