STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL06444.1Glycosyltransferase involved in cell wall bisynthesis. (382 aa)    
Predicted Functional Partners:
SHL06534.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.856
SHL06417.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.850
SHL06122.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.845
SHL06321.1
Hypothetical protein.
  
 
  0.807
SHL06505.1
Sulfotransferase domain-containing protein.
   
   0.791
SHL06350.1
Hypothetical protein; Manually curated.
       0.773
SHL06379.1
Hypothetical protein.
       0.773
SHL06477.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SHL06253.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.757
SHL06214.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.726
Your Current Organism:
Rhodothermus profundi
NCBI taxonomy Id: 633813
Other names: DSM 22212, JCM 15944, R. profundi, Rhodothermus profundi Marteinsson et al. 2010, Rhodothermus sp. PRI 2902, strain PRI 2902
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.