STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLX_02090Transposase. (143 aa)    
Predicted Functional Partners:
GLX_02050
Transposase.
     0.879
GLX_18430
Transposase.
 
     0.799
GLX_18740
Transposase; Fragment.
 
     0.789
GLX_02330
Transposase.
 
     0.788
GLX_23400
Transposase; Fragment.
 
     0.772
GLX_23390
Transposase; Fragment.
 
     0.769
GLX_02080
Transposase.
  
    0.566
GLX_02070
Transposase.
       0.563
GLX_02100
Major facilitator superfamily glycerol uptake transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.477
GLX_02060
Transposase.
       0.438
Your Current Organism:
Komagataeibacter medellinensis
NCBI taxonomy Id: 634177
Other names: Gluconacetobacter medellinensis NBRC 3288, Gluconacetobacter xylinus IFO 3288, Gluconacetobacter xylinus NBRC 3288, K. medellinensis NBRC 3288, Komagataeibacter medellinensis NBRC 3288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.