STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLX_27770Glycosyltransferase. (401 aa)    
Predicted Functional Partners:
gumK
Glucuronosyltransferase GumK.
      0.918
GLX_27780
Glycosyltransferase.
 
 
 0.916
GLX_27760
alpha-L-Rha alpha-1,3-L-rhamnosyltransferase.
 
 
 0.840
GLX_27840
Glycosyltransferase.
  
     0.686
GLX_27830
Protein-tyrosine kinase.
 
  
 0.678
GLX_27740
Lipopolysaccharide modification acyltransferase.
 
    0.598
GLX_27710
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.585
GLX_27860
Hypothetical protein.
 
     0.584
GLX_27810
Sugar transferase.
 
  
 0.583
GLX_27720
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.574
Your Current Organism:
Komagataeibacter medellinensis
NCBI taxonomy Id: 634177
Other names: Gluconacetobacter medellinensis NBRC 3288, Gluconacetobacter xylinus IFO 3288, Gluconacetobacter xylinus NBRC 3288, K. medellinensis NBRC 3288, Komagataeibacter medellinensis NBRC 3288
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