Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP45717.1 | SFP45735.1 | SAMN04488241_10252 | SAMN04488241_10253 | Hypothetical protein. | Zinc protease. | 0.581 |
SFP45717.1 | SFP45750.1 | SAMN04488241_10252 | SAMN04488241_10254 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SFP45717.1 | SFP45781.1 | SAMN04488241_10252 | SAMN04488241_10256 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SFP45717.1 | SFP45810.1 | SAMN04488241_10252 | SAMN04488241_10258 | Hypothetical protein. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.581 |
SFP45717.1 | queA | SAMN04488241_10252 | SAMN04488241_10257 | Hypothetical protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.581 |
SFP45717.1 | tgt | SAMN04488241_10252 | SAMN04488241_10255 | Hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.581 |
SFP45735.1 | SFP45717.1 | SAMN04488241_10253 | SAMN04488241_10252 | Zinc protease. | Hypothetical protein. | 0.581 |
SFP45735.1 | SFP45750.1 | SAMN04488241_10253 | SAMN04488241_10254 | Zinc protease. | Hypothetical protein. | 0.773 |
SFP45735.1 | SFP45781.1 | SAMN04488241_10253 | SAMN04488241_10256 | Zinc protease. | Hypothetical protein. | 0.773 |
SFP45735.1 | SFP45810.1 | SAMN04488241_10253 | SAMN04488241_10258 | Zinc protease. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.777 |
SFP45735.1 | queA | SAMN04488241_10253 | SAMN04488241_10257 | Zinc protease. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.773 |
SFP45735.1 | tgt | SAMN04488241_10253 | SAMN04488241_10255 | Zinc protease. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.790 |
SFP45750.1 | SFP45717.1 | SAMN04488241_10254 | SAMN04488241_10252 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SFP45750.1 | SFP45735.1 | SAMN04488241_10254 | SAMN04488241_10253 | Hypothetical protein. | Zinc protease. | 0.773 |
SFP45750.1 | SFP45781.1 | SAMN04488241_10254 | SAMN04488241_10256 | Hypothetical protein. | Hypothetical protein. | 0.786 |
SFP45750.1 | SFP45810.1 | SAMN04488241_10254 | SAMN04488241_10258 | Hypothetical protein. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.774 |
SFP45750.1 | queA | SAMN04488241_10254 | SAMN04488241_10257 | Hypothetical protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.773 |
SFP45750.1 | tgt | SAMN04488241_10254 | SAMN04488241_10255 | Hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.818 |
SFP45781.1 | SFP45717.1 | SAMN04488241_10256 | SAMN04488241_10252 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SFP45781.1 | SFP45735.1 | SAMN04488241_10256 | SAMN04488241_10253 | Hypothetical protein. | Zinc protease. | 0.773 |
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