STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP57028.1NADP-dependent aldehyde dehydrogenase. (510 aa)    
Predicted Functional Partners:
SFP68933.1
2-oxoglutarate dehydrogenase E1 component.
  
 
 0.921
SFP38559.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
     
 0.903
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 0.873
SFP55082.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.859
SFP89707.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.811
SFP39242.1
Hypothetical protein.
   
 
  0.783
SFP33851.1
Hypothetical protein.
   
 
  0.783
SFP56956.1
D-galactose 1-dehydrogenase.
 
 
  0.781
SFP56975.1
Hypothetical protein.
 
     0.778
SFP72833.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
   
 0.766
Your Current Organism:
Sphingomonas rubra
NCBI taxonomy Id: 634430
Other names: CGMCC 1.9113, JCM 16230, S. rubra, Sphingomonas rubra Huo et al. 2011, Sphingomonas sp. BH3, strain BH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.