Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP34719.1 | SFP60775.1 | SAMN04488241_10183 | SAMN04488241_10447 | Exodeoxyribonuclease-3. | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.658 |
SFP34719.1 | SFP61428.1 | SAMN04488241_10183 | SAMN04488241_10488 | Exodeoxyribonuclease-3. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.658 |
SFP34719.1 | SFP82729.1 | SAMN04488241_10183 | SAMN04488241_10854 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease-3. | 0.918 |
SFP47001.1 | SFP61428.1 | SAMN04488241_102133 | SAMN04488241_10488 | 23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.537 |
SFP60775.1 | SFP34719.1 | SAMN04488241_10447 | SAMN04488241_10183 | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.658 |
SFP60775.1 | SFP61428.1 | SAMN04488241_10447 | SAMN04488241_10488 | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.451 |
SFP60775.1 | SFP82729.1 | SAMN04488241_10447 | SAMN04488241_10854 | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.658 |
SFP60775.1 | cmk | SAMN04488241_10447 | SAMN04488241_10156 | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | Cytidylate kinase. | 0.730 |
SFP60775.1 | der | SAMN04488241_10447 | SAMN04488241_102334 | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.749 |
SFP60775.1 | pheT | SAMN04488241_10447 | SAMN04488241_10990 | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.511 |
SFP61410.1 | SFP61428.1 | SAMN04488241_10487 | SAMN04488241_10488 | 16S rRNA (guanine966-N2)-methyltransferase. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.879 |
SFP61410.1 | SFP61442.1 | SAMN04488241_10487 | SAMN04488241_10489 | 16S rRNA (guanine966-N2)-methyltransferase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.764 |
SFP61410.1 | SFP61453.1 | SAMN04488241_10487 | SAMN04488241_10490 | 16S rRNA (guanine966-N2)-methyltransferase. | MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG. | 0.507 |
SFP61410.1 | der | SAMN04488241_10487 | SAMN04488241_102334 | 16S rRNA (guanine966-N2)-methyltransferase. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.416 |
SFP61428.1 | SFP34719.1 | SAMN04488241_10488 | SAMN04488241_10183 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.658 |
SFP61428.1 | SFP47001.1 | SAMN04488241_10488 | SAMN04488241_102133 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.537 |
SFP61428.1 | SFP60775.1 | SAMN04488241_10488 | SAMN04488241_10447 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.451 |
SFP61428.1 | SFP61410.1 | SAMN04488241_10488 | SAMN04488241_10487 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 16S rRNA (guanine966-N2)-methyltransferase. | 0.879 |
SFP61428.1 | SFP61442.1 | SAMN04488241_10488 | SAMN04488241_10489 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.764 |
SFP61428.1 | SFP61453.1 | SAMN04488241_10488 | SAMN04488241_10490 | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG. | 0.507 |
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