Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP33512.1 | SFP33851.1 | SAMN04488241_10116 | SAMN04488241_10134 | Hypothetical protein. | Hypothetical protein. | 0.787 |
SFP33512.1 | SFP36883.1 | SAMN04488241_10116 | SAMN04488241_101194 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.999 |
SFP33512.1 | SFP39242.1 | SAMN04488241_10116 | SAMN04488241_101338 | Hypothetical protein. | Hypothetical protein. | 0.787 |
SFP33512.1 | SFP55082.1 | SAMN04488241_10116 | SAMN04488241_10392 | Hypothetical protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.529 |
SFP33512.1 | SFP68774.1 | SAMN04488241_10116 | SAMN04488241_105154 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.718 |
SFP33512.1 | SFP75147.1 | SAMN04488241_10116 | SAMN04488241_106204 | Hypothetical protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
SFP33512.1 | rpoB | SAMN04488241_10116 | SAMN04488241_10286 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.451 |
SFP33851.1 | SFP33512.1 | SAMN04488241_10134 | SAMN04488241_10116 | Hypothetical protein. | Hypothetical protein. | 0.787 |
SFP33851.1 | SFP36883.1 | SAMN04488241_10134 | SAMN04488241_101194 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.947 |
SFP33851.1 | SFP55082.1 | SAMN04488241_10134 | SAMN04488241_10392 | Hypothetical protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.443 |
SFP33851.1 | SFP68774.1 | SAMN04488241_10134 | SAMN04488241_105154 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.744 |
SFP33851.1 | SFP75147.1 | SAMN04488241_10134 | SAMN04488241_106204 | Hypothetical protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.563 |
SFP33851.1 | rpoA | SAMN04488241_10134 | SAMN04488241_102248 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.981 |
SFP33851.1 | rpoB | SAMN04488241_10134 | SAMN04488241_10286 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.976 |
SFP36883.1 | SFP33512.1 | SAMN04488241_101194 | SAMN04488241_10116 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.999 |
SFP36883.1 | SFP33851.1 | SAMN04488241_101194 | SAMN04488241_10134 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.947 |
SFP36883.1 | SFP39242.1 | SAMN04488241_101194 | SAMN04488241_101338 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.947 |
SFP36883.1 | SFP55082.1 | SAMN04488241_101194 | SAMN04488241_10392 | Response regulator receiver domain-containing protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.561 |
SFP36883.1 | SFP68774.1 | SAMN04488241_101194 | SAMN04488241_105154 | Response regulator receiver domain-containing protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.846 |
SFP36883.1 | SFP75147.1 | SAMN04488241_101194 | SAMN04488241_106204 | Response regulator receiver domain-containing protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
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