Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP37505.1 | SFP69491.1 | SAMN04488241_101227 | SAMN04488241_105196 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFP37505.1 | SFP79262.1 | SAMN04488241_101227 | SAMN04488241_107124 | Hypothetical protein. | EF hand. | 0.773 |
SFP37505.1 | SFP86525.1 | SAMN04488241_101227 | SAMN04488241_10953 | Hypothetical protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.774 |
SFP37505.1 | SFP93512.1 | SAMN04488241_101227 | SAMN04488241_111105 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFP38104.1 | SFP69491.1 | SAMN04488241_101265 | SAMN04488241_105196 | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | Hypothetical protein. | 0.887 |
SFP69474.1 | SFP69491.1 | SAMN04488241_105195 | SAMN04488241_105196 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Hypothetical protein. | 0.879 |
SFP69474.1 | SFP69502.1 | SAMN04488241_105195 | SAMN04488241_105197 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Hypothetical protein. | 0.856 |
SFP69474.1 | infA | SAMN04488241_105195 | SAMN04488241_105194 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.788 |
SFP69491.1 | SFP37505.1 | SAMN04488241_105196 | SAMN04488241_101227 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFP69491.1 | SFP38104.1 | SAMN04488241_105196 | SAMN04488241_101265 | Hypothetical protein. | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | 0.887 |
SFP69491.1 | SFP69474.1 | SAMN04488241_105196 | SAMN04488241_105195 | Hypothetical protein. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.879 |
SFP69491.1 | SFP69502.1 | SAMN04488241_105196 | SAMN04488241_105197 | Hypothetical protein. | Hypothetical protein. | 0.895 |
SFP69491.1 | SFP79262.1 | SAMN04488241_105196 | SAMN04488241_107124 | Hypothetical protein. | EF hand. | 0.774 |
SFP69491.1 | SFP86525.1 | SAMN04488241_105196 | SAMN04488241_10953 | Hypothetical protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.774 |
SFP69491.1 | SFP93512.1 | SAMN04488241_105196 | SAMN04488241_111105 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFP69491.1 | eno | SAMN04488241_105196 | SAMN04488241_104228 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.909 |
SFP69491.1 | infA | SAMN04488241_105196 | SAMN04488241_105194 | Hypothetical protein. | Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.783 |
SFP69491.1 | pnp | SAMN04488241_105196 | SAMN04488241_11168 | Hypothetical protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.946 |
SFP69502.1 | SFP69474.1 | SAMN04488241_105197 | SAMN04488241_105195 | Hypothetical protein. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.856 |
SFP69502.1 | SFP69491.1 | SAMN04488241_105197 | SAMN04488241_105196 | Hypothetical protein. | Hypothetical protein. | 0.895 |
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