STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP67385.1TspO and MBR related proteins. (578 aa)    
Predicted Functional Partners:
SFP72833.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
 
 0.863
SFP67375.1
Predicted thiol-disulfide oxidoreductase YuxK, DCC family.
       0.773
SFP33468.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  
 
 0.684
SFP54173.1
single-stranded-DNA-specific exonuclease.
  
     0.646
SFP60119.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
 0.629
SFP98552.1
Protein of unknown function.
  
     0.586
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.579
SFP46412.1
Beta-carotene 3-hydroxylase.
   
 0.565
SFP96426.1
Hypothetical protein.
 
 
 0.565
SFP67405.1
CubicO group peptidase, beta-lactamase class C family.
       0.550
Your Current Organism:
Sphingomonas rubra
NCBI taxonomy Id: 634430
Other names: CGMCC 1.9113, JCM 16230, S. rubra, Sphingomonas rubra Huo et al. 2011, Sphingomonas sp. BH3, strain BH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.