STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP67602.1Uncharacterized conserved protein YaaN involved in tellurite resistance. (401 aa)    
Predicted Functional Partners:
SFP67624.1
Hypothetical protein.
 
     0.956
SFP67564.1
GTP-binding protein.
       0.709
SFP67583.1
Hypothetical protein.
 
     0.589
SFP86525.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.512
SFP37709.1
Hypothetical protein.
  
     0.508
SFP61915.1
Hypothetical protein.
  
     0.475
SFP93512.1
Hypothetical protein.
  
     0.474
SFP56012.1
Ferrous iron transport protein A.
  
     0.471
SFP66747.1
Hypothetical protein.
  
     0.468
SFP37505.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Sphingomonas rubra
NCBI taxonomy Id: 634430
Other names: CGMCC 1.9113, JCM 16230, S. rubra, Sphingomonas rubra Huo et al. 2011, Sphingomonas sp. BH3, strain BH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.