Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP46845.1 | SFP74234.1 | SAMN04488241_102123 | SAMN04488241_106146 | Hypothetical protein. | TonB-dependent receptor. | 0.540 |
SFP56790.1 | SFP74217.1 | SAMN04488241_103197 | SAMN04488241_106145 | TonB-dependent receptor. | Hypothetical protein. | 0.548 |
SFP56790.1 | SFP74234.1 | SAMN04488241_103197 | SAMN04488241_106146 | TonB-dependent receptor. | TonB-dependent receptor. | 0.698 |
SFP67583.1 | SFP74217.1 | SAMN04488241_10581 | SAMN04488241_106145 | Hypothetical protein. | Hypothetical protein. | 0.404 |
SFP67583.1 | SFP74234.1 | SAMN04488241_10581 | SAMN04488241_106146 | Hypothetical protein. | TonB-dependent receptor. | 0.660 |
SFP67583.1 | SFP86186.1 | SAMN04488241_10581 | SAMN04488241_10932 | Hypothetical protein. | Aspartyl protease. | 0.734 |
SFP72266.1 | SFP74234.1 | SAMN04488241_10614 | SAMN04488241_106146 | Iron complex outermembrane recepter protein. | TonB-dependent receptor. | 0.546 |
SFP74217.1 | SFP56790.1 | SAMN04488241_106145 | SAMN04488241_103197 | Hypothetical protein. | TonB-dependent receptor. | 0.548 |
SFP74217.1 | SFP67583.1 | SAMN04488241_106145 | SAMN04488241_10581 | Hypothetical protein. | Hypothetical protein. | 0.404 |
SFP74217.1 | SFP74234.1 | SAMN04488241_106145 | SAMN04488241_106146 | Hypothetical protein. | TonB-dependent receptor. | 0.948 |
SFP74217.1 | SFP74261.1 | SAMN04488241_106145 | SAMN04488241_106148 | Hypothetical protein. | General secretion pathway protein C. | 0.534 |
SFP74217.1 | SFP74278.1 | SAMN04488241_106145 | SAMN04488241_106149 | Hypothetical protein. | General secretion pathway protein D. | 0.503 |
SFP74217.1 | SFP86186.1 | SAMN04488241_106145 | SAMN04488241_10932 | Hypothetical protein. | Aspartyl protease. | 0.453 |
SFP74217.1 | SFP86323.1 | SAMN04488241_106145 | SAMN04488241_10942 | Hypothetical protein. | TonB dependent receptor. | 0.512 |
SFP74234.1 | SFP46845.1 | SAMN04488241_106146 | SAMN04488241_102123 | TonB-dependent receptor. | Hypothetical protein. | 0.540 |
SFP74234.1 | SFP56790.1 | SAMN04488241_106146 | SAMN04488241_103197 | TonB-dependent receptor. | TonB-dependent receptor. | 0.698 |
SFP74234.1 | SFP67583.1 | SAMN04488241_106146 | SAMN04488241_10581 | TonB-dependent receptor. | Hypothetical protein. | 0.660 |
SFP74234.1 | SFP72266.1 | SAMN04488241_106146 | SAMN04488241_10614 | TonB-dependent receptor. | Iron complex outermembrane recepter protein. | 0.546 |
SFP74234.1 | SFP74217.1 | SAMN04488241_106146 | SAMN04488241_106145 | TonB-dependent receptor. | Hypothetical protein. | 0.948 |
SFP74234.1 | SFP74261.1 | SAMN04488241_106146 | SAMN04488241_106148 | TonB-dependent receptor. | General secretion pathway protein C. | 0.589 |
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