Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP73391.1 | SFP73413.1 | SAMN04488241_10690 | SAMN04488241_10691 | Rv0623-like transcription factor. | Cysteine synthase A. | 0.547 |
SFP73391.1 | SFP73432.1 | SAMN04488241_10690 | SAMN04488241_10692 | Rv0623-like transcription factor. | Hypothetical protein. | 0.432 |
SFP73391.1 | vapC | SAMN04488241_10690 | SAMN04488241_10689 | Rv0623-like transcription factor. | Uncharacterized protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.984 |
SFP73413.1 | SFP73391.1 | SAMN04488241_10691 | SAMN04488241_10690 | Cysteine synthase A. | Rv0623-like transcription factor. | 0.547 |
SFP73413.1 | SFP73432.1 | SAMN04488241_10691 | SAMN04488241_10692 | Cysteine synthase A. | Hypothetical protein. | 0.604 |
SFP73413.1 | vapC | SAMN04488241_10691 | SAMN04488241_10689 | Cysteine synthase A. | Uncharacterized protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.547 |
SFP73432.1 | SFP73391.1 | SAMN04488241_10692 | SAMN04488241_10690 | Hypothetical protein. | Rv0623-like transcription factor. | 0.432 |
SFP73432.1 | SFP73413.1 | SAMN04488241_10692 | SAMN04488241_10691 | Hypothetical protein. | Cysteine synthase A. | 0.604 |
SFP73432.1 | vapC | SAMN04488241_10692 | SAMN04488241_10689 | Hypothetical protein. | Uncharacterized protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.432 |
vapC | SFP73391.1 | SAMN04488241_10689 | SAMN04488241_10690 | Uncharacterized protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Rv0623-like transcription factor. | 0.984 |
vapC | SFP73413.1 | SAMN04488241_10689 | SAMN04488241_10691 | Uncharacterized protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Cysteine synthase A. | 0.547 |
vapC | SFP73432.1 | SAMN04488241_10689 | SAMN04488241_10692 | Uncharacterized protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.432 |