STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP78948.1General stress protein 26. (158 aa)    
Predicted Functional Partners:
SFP35425.1
Hypothetical protein.
  
     0.683
SFP74405.1
General secretion pathway protein L.
  
     0.607
SFP36130.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
    0.595
SFP69650.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
    0.590
SFP74261.1
General secretion pathway protein C.
  
     0.589
SFP83349.1
Hypothetical protein.
   
    0.578
SFP94243.1
Outer membrane immunogenic protein.
  
     0.543
SFP40466.1
Heavy-metal resistance.
  
     0.502
SFP36812.1
Translocation and assembly module TamB.
  
     0.483
SFP37833.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
     0.474
Your Current Organism:
Sphingomonas rubra
NCBI taxonomy Id: 634430
Other names: CGMCC 1.9113, JCM 16230, S. rubra, Sphingomonas rubra Huo et al. 2011, Sphingomonas sp. BH3, strain BH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.