Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP82086.1 | SFP82103.1 | SAMN04488241_10812 | SAMN04488241_10813 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.982 |
SFP82086.1 | SFP82119.1 | SAMN04488241_10812 | SAMN04488241_10814 | Signal transduction histidine kinase. | Hypothetical protein. | 0.756 |
SFP82103.1 | SFP82086.1 | SAMN04488241_10813 | SAMN04488241_10812 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.982 |
SFP82103.1 | SFP82119.1 | SAMN04488241_10813 | SAMN04488241_10814 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.760 |
SFP82119.1 | SFP82086.1 | SAMN04488241_10814 | SAMN04488241_10812 | Hypothetical protein. | Signal transduction histidine kinase. | 0.756 |
SFP82119.1 | SFP82103.1 | SAMN04488241_10814 | SAMN04488241_10813 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.760 |
SFP82119.1 | SFP82133.1 | SAMN04488241_10814 | SAMN04488241_10815 | Hypothetical protein. | Arsenical pump membrane protein. | 0.517 |
SFP82119.1 | SFP82155.1 | SAMN04488241_10814 | SAMN04488241_10816 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.452 |
SFP82119.1 | polA | SAMN04488241_10814 | SAMN04488241_10954 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.470 |
SFP82133.1 | SFP82119.1 | SAMN04488241_10815 | SAMN04488241_10814 | Arsenical pump membrane protein. | Hypothetical protein. | 0.517 |
SFP82133.1 | SFP82155.1 | SAMN04488241_10815 | SAMN04488241_10816 | Arsenical pump membrane protein. | Predicted arabinose efflux permease, MFS family. | 0.857 |
SFP82155.1 | SFP82119.1 | SAMN04488241_10816 | SAMN04488241_10814 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.452 |
SFP82155.1 | SFP82133.1 | SAMN04488241_10816 | SAMN04488241_10815 | Predicted arabinose efflux permease, MFS family. | Arsenical pump membrane protein. | 0.857 |
polA | SFP82119.1 | SAMN04488241_10954 | SAMN04488241_10814 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Hypothetical protein. | 0.470 |