Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP90748.1 | SFP90758.1 | SAMN04488241_110152 | SAMN04488241_110153 | Hypothetical protein. | Hypothetical protein. | 0.427 |
SFP90748.1 | SFP90784.1 | SAMN04488241_110152 | SAMN04488241_110155 | Hypothetical protein. | Disulfide bond formation protein DsbB. | 0.626 |
SFP90748.1 | SFP90792.1 | SAMN04488241_110152 | SAMN04488241_110156 | Hypothetical protein. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.607 |
SFP90748.1 | SFP90805.1 | SAMN04488241_110152 | SAMN04488241_110157 | Hypothetical protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.406 |
SFP90748.1 | coq7 | SAMN04488241_110152 | SAMN04488241_110154 | Hypothetical protein. | Ubiquinone biosynthesis monooxygenase Coq7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 0.626 |
SFP90758.1 | SFP90748.1 | SAMN04488241_110153 | SAMN04488241_110152 | Hypothetical protein. | Hypothetical protein. | 0.427 |
SFP90758.1 | SFP90784.1 | SAMN04488241_110153 | SAMN04488241_110155 | Hypothetical protein. | Disulfide bond formation protein DsbB. | 0.788 |
SFP90758.1 | SFP90792.1 | SAMN04488241_110153 | SAMN04488241_110156 | Hypothetical protein. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.788 |
SFP90758.1 | SFP90805.1 | SAMN04488241_110153 | SAMN04488241_110157 | Hypothetical protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.539 |
SFP90758.1 | coq7 | SAMN04488241_110153 | SAMN04488241_110154 | Hypothetical protein. | Ubiquinone biosynthesis monooxygenase Coq7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 0.788 |
SFP90758.1 | nadD | SAMN04488241_110153 | SAMN04488241_110160 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.539 |
SFP90758.1 | rlmH | SAMN04488241_110153 | SAMN04488241_110158 | Hypothetical protein. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.539 |
SFP90758.1 | rsfS | SAMN04488241_110153 | SAMN04488241_110159 | Hypothetical protein. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.539 |
SFP90784.1 | SFP90748.1 | SAMN04488241_110155 | SAMN04488241_110152 | Disulfide bond formation protein DsbB. | Hypothetical protein. | 0.626 |
SFP90784.1 | SFP90758.1 | SAMN04488241_110155 | SAMN04488241_110153 | Disulfide bond formation protein DsbB. | Hypothetical protein. | 0.788 |
SFP90784.1 | SFP90792.1 | SAMN04488241_110155 | SAMN04488241_110156 | Disulfide bond formation protein DsbB. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.863 |
SFP90784.1 | SFP90805.1 | SAMN04488241_110155 | SAMN04488241_110157 | Disulfide bond formation protein DsbB. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.744 |
SFP90784.1 | coq7 | SAMN04488241_110155 | SAMN04488241_110154 | Disulfide bond formation protein DsbB. | Ubiquinone biosynthesis monooxygenase Coq7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 0.889 |
SFP90784.1 | nadD | SAMN04488241_110155 | SAMN04488241_110160 | Disulfide bond formation protein DsbB. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.792 |
SFP90784.1 | rlmH | SAMN04488241_110155 | SAMN04488241_110158 | Disulfide bond formation protein DsbB. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.777 |
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