STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF81217.1Regulator of protease activity HflC, stomatin/prohibitin superfamily. (311 aa)    
Predicted Functional Partners:
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.964
SHF81243.1
Hypothetical protein.
  
  
 0.846
SHG18416.1
Predicted Zn-dependent peptidase.
  
 0.604
SHG43743.1
Small GTP-binding protein domain-containing protein.
    
 0.588
SHG84935.1
Z1 domain-containing protein.
    
 0.588
SHF86648.1
Zinc protease.
   
 0.578
SHG02547.1
Zinc protease.
   
 0.578
SHG18446.1
Predicted Zn-dependent peptidase.
   
 0.578
SHG33664.1
Diacylglycerol kinase family enzyme.
   
 
 0.535
SHG67028.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
    0.516
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.