Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF79735.1 | SHF85889.1 | SAMN05216361_0433 | SAMN05216361_0657 | Iron complex outermembrane recepter protein. | Uncharacterized membrane protein. | 0.684 |
SHF79844.1 | SHF85889.1 | SAMN05216361_0437 | SAMN05216361_0657 | Protein of unknown function. | Uncharacterized membrane protein. | 0.428 |
SHF79844.1 | macB | SAMN05216361_0437 | SAMN05216361_1978 | Protein of unknown function. | Macrolide transport system ATP-binding/permease protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.669 |
SHF81447.1 | SHF85889.1 | SAMN05216361_0492 | SAMN05216361_0657 | Hypothetical protein. | Uncharacterized membrane protein. | 0.565 |
SHF84594.1 | SHF85889.1 | SAMN05216361_0612 | SAMN05216361_0657 | Iron complex outermembrane recepter protein. | Uncharacterized membrane protein. | 0.688 |
SHF85889.1 | SHF79735.1 | SAMN05216361_0657 | SAMN05216361_0433 | Uncharacterized membrane protein. | Iron complex outermembrane recepter protein. | 0.684 |
SHF85889.1 | SHF79844.1 | SAMN05216361_0657 | SAMN05216361_0437 | Uncharacterized membrane protein. | Protein of unknown function. | 0.428 |
SHF85889.1 | SHF81447.1 | SAMN05216361_0657 | SAMN05216361_0492 | Uncharacterized membrane protein. | Hypothetical protein. | 0.565 |
SHF85889.1 | SHF84594.1 | SAMN05216361_0657 | SAMN05216361_0612 | Uncharacterized membrane protein. | Iron complex outermembrane recepter protein. | 0.688 |
SHF85889.1 | SHG85665.1 | SAMN05216361_0657 | SAMN05216361_3112 | Uncharacterized membrane protein. | Hypothetical protein. | 0.565 |
SHF85889.1 | SHG86507.1 | SAMN05216361_0657 | SAMN05216361_3142 | Uncharacterized membrane protein. | alpha-L-rhamnosidase. | 0.419 |
SHF85889.1 | SHH11197.1 | SAMN05216361_0657 | SAMN05216361_3816 | Uncharacterized membrane protein. | L-rhamnose-H+ transport protein. | 0.563 |
SHF85889.1 | SHH13257.1 | SAMN05216361_0657 | SAMN05216361_3898 | Uncharacterized membrane protein. | Hypothetical protein. | 0.565 |
SHF85889.1 | SHH18493.1 | SAMN05216361_0657 | SAMN05216361_3948 | Uncharacterized membrane protein. | CAAX protease self-immunity. | 0.658 |
SHF85889.1 | macB | SAMN05216361_0657 | SAMN05216361_1978 | Uncharacterized membrane protein. | Macrolide transport system ATP-binding/permease protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.451 |
SHG85665.1 | SHF85889.1 | SAMN05216361_3112 | SAMN05216361_0657 | Hypothetical protein. | Uncharacterized membrane protein. | 0.565 |
SHG86507.1 | SHF85889.1 | SAMN05216361_3142 | SAMN05216361_0657 | alpha-L-rhamnosidase. | Uncharacterized membrane protein. | 0.419 |
SHG86507.1 | SHH11197.1 | SAMN05216361_3142 | SAMN05216361_3816 | alpha-L-rhamnosidase. | L-rhamnose-H+ transport protein. | 0.775 |
SHH11197.1 | SHF85889.1 | SAMN05216361_3816 | SAMN05216361_0657 | L-rhamnose-H+ transport protein. | Uncharacterized membrane protein. | 0.563 |
SHH11197.1 | SHG86507.1 | SAMN05216361_3816 | SAMN05216361_3142 | L-rhamnose-H+ transport protein. | alpha-L-rhamnosidase. | 0.775 |
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