STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCGlucuronate isomerase. (473 aa)    
Predicted Functional Partners:
SHF87102.1
Fructuronate reductase.
 
 
 0.994
SHF87151.1
Altronate hydrolase.
  
 0.973
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.962
SHF87042.1
2-dehydro-3-deoxygluconokinase.
 
   
 0.897
SHF87073.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
     
 0.809
SHF87178.1
LacI family transcriptional regulator.
 
   
 0.684
SHG48115.1
Mannonate dehydratase.
 
   
 0.672
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.670
SHF81053.1
L-ribulose-5-phosphate 4-epimerase.
     
 0.604
SHF86835.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
    
 0.592
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.