Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF85294.1 | SHF90405.1 | SAMN05216361_0636 | SAMN05216361_0824 | BNR repeat-like domain-containing protein. | Oligogalacturonide lyase. | 0.730 |
SHF85294.1 | SHF90618.1 | SAMN05216361_0636 | SAMN05216361_0832 | BNR repeat-like domain-containing protein. | TonB-dependent receptor. | 0.759 |
SHF85294.1 | SHF90670.1 | SAMN05216361_0636 | SAMN05216361_0834 | BNR repeat-like domain-containing protein. | Lysophospholipase L1. | 0.809 |
SHF85294.1 | SHF93575.1 | SAMN05216361_0636 | SAMN05216361_0943 | BNR repeat-like domain-containing protein. | Papain family cysteine protease. | 0.495 |
SHF85294.1 | SHG18389.1 | SAMN05216361_0636 | SAMN05216361_1581 | BNR repeat-like domain-containing protein. | Glycosyl hydrolase family 115. | 0.594 |
SHF85294.1 | SHH24304.1 | SAMN05216361_0636 | SAMN05216361_4141 | BNR repeat-like domain-containing protein. | Beta-galactosidase GanA. | 0.744 |
SHF90405.1 | SHF85294.1 | SAMN05216361_0824 | SAMN05216361_0636 | Oligogalacturonide lyase. | BNR repeat-like domain-containing protein. | 0.730 |
SHF90405.1 | SHF90618.1 | SAMN05216361_0824 | SAMN05216361_0832 | Oligogalacturonide lyase. | TonB-dependent receptor. | 0.705 |
SHF90405.1 | SHF90670.1 | SAMN05216361_0824 | SAMN05216361_0834 | Oligogalacturonide lyase. | Lysophospholipase L1. | 0.795 |
SHF90405.1 | SHF93575.1 | SAMN05216361_0824 | SAMN05216361_0943 | Oligogalacturonide lyase. | Papain family cysteine protease. | 0.647 |
SHF90405.1 | SHG18389.1 | SAMN05216361_0824 | SAMN05216361_1581 | Oligogalacturonide lyase. | Glycosyl hydrolase family 115. | 0.675 |
SHF90405.1 | SHH24304.1 | SAMN05216361_0824 | SAMN05216361_4141 | Oligogalacturonide lyase. | Beta-galactosidase GanA. | 0.560 |
SHF90587.1 | SHF90618.1 | SAMN05216361_0831 | SAMN05216361_0832 | Beta-galactosidase. | TonB-dependent receptor. | 0.711 |
SHF90587.1 | SHF90646.1 | SAMN05216361_0831 | SAMN05216361_0833 | Beta-galactosidase. | Sugar phosphate isomerase/epimerase. | 0.746 |
SHF90587.1 | SHF90670.1 | SAMN05216361_0831 | SAMN05216361_0834 | Beta-galactosidase. | Lysophospholipase L1. | 0.454 |
SHF90587.1 | SHH24304.1 | SAMN05216361_0831 | SAMN05216361_4141 | Beta-galactosidase. | Beta-galactosidase GanA. | 0.519 |
SHF90618.1 | SHF85294.1 | SAMN05216361_0832 | SAMN05216361_0636 | TonB-dependent receptor. | BNR repeat-like domain-containing protein. | 0.759 |
SHF90618.1 | SHF90405.1 | SAMN05216361_0832 | SAMN05216361_0824 | TonB-dependent receptor. | Oligogalacturonide lyase. | 0.705 |
SHF90618.1 | SHF90587.1 | SAMN05216361_0832 | SAMN05216361_0831 | TonB-dependent receptor. | Beta-galactosidase. | 0.711 |
SHF90618.1 | SHF90646.1 | SAMN05216361_0832 | SAMN05216361_0833 | TonB-dependent receptor. | Sugar phosphate isomerase/epimerase. | 0.723 |
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