Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF79498.1 | SHF86835.1 | SAMN05216361_0425 | SAMN05216361_0688 | Pectate lyase. | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | 0.942 |
SHF79498.1 | SHF90486.1 | SAMN05216361_0425 | SAMN05216361_0827 | Pectate lyase. | Hypothetical protein. | 0.798 |
SHF79498.1 | SHF90670.1 | SAMN05216361_0425 | SAMN05216361_0834 | Pectate lyase. | Lysophospholipase L1. | 0.867 |
SHF79498.1 | SHG04272.1 | SAMN05216361_0425 | SAMN05216361_1063 | Pectate lyase. | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | 0.917 |
SHF79498.1 | SHG18389.1 | SAMN05216361_0425 | SAMN05216361_1581 | Pectate lyase. | Glycosyl hydrolase family 115. | 0.561 |
SHF79498.1 | SHG44828.1 | SAMN05216361_0425 | SAMN05216361_2280 | Pectate lyase. | Hypothetical protein. | 0.799 |
SHF79498.1 | SHG74714.1 | SAMN05216361_0425 | SAMN05216361_2974 | Pectate lyase. | Protein of unknown function. | 0.718 |
SHF86835.1 | SHF79498.1 | SAMN05216361_0688 | SAMN05216361_0425 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Pectate lyase. | 0.942 |
SHF86835.1 | SHF90486.1 | SAMN05216361_0688 | SAMN05216361_0827 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Hypothetical protein. | 0.560 |
SHF86835.1 | SHF90670.1 | SAMN05216361_0688 | SAMN05216361_0834 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Lysophospholipase L1. | 0.919 |
SHF86835.1 | SHF90725.1 | SAMN05216361_0688 | SAMN05216361_0836 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.677 |
SHF86835.1 | SHG18389.1 | SAMN05216361_0688 | SAMN05216361_1581 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Glycosyl hydrolase family 115. | 0.810 |
SHF86835.1 | SHG44828.1 | SAMN05216361_0688 | SAMN05216361_2280 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Hypothetical protein. | 0.641 |
SHF86835.1 | SHG74714.1 | SAMN05216361_0688 | SAMN05216361_2974 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Protein of unknown function. | 0.486 |
SHF86835.1 | SHH09687.1 | SAMN05216361_0688 | SAMN05216361_3761 | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.462 |
SHF90486.1 | SHF79498.1 | SAMN05216361_0827 | SAMN05216361_0425 | Hypothetical protein. | Pectate lyase. | 0.798 |
SHF90486.1 | SHF86835.1 | SAMN05216361_0827 | SAMN05216361_0688 | Hypothetical protein. | Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. | 0.560 |
SHF90486.1 | SHF90646.1 | SAMN05216361_0827 | SAMN05216361_0833 | Hypothetical protein. | Sugar phosphate isomerase/epimerase. | 0.596 |
SHF90486.1 | SHF90670.1 | SAMN05216361_0827 | SAMN05216361_0834 | Hypothetical protein. | Lysophospholipase L1. | 0.903 |
SHF90486.1 | SHF90725.1 | SAMN05216361_0827 | SAMN05216361_0836 | Hypothetical protein. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.805 |
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