STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF92480.1Glutathione S-transferase; Belongs to the GST superfamily. (201 aa)    
Predicted Functional Partners:
SHF82211.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.848
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
  
  
  0.844
SHG21477.1
Glutathione reductase (NADPH).
     
 0.841
SHG66322.1
Glutaredoxin-family domain-containing protein.
   
 0.841
SHG46026.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.818
SHH08413.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.818
SHF72840.1
Glutathione S-transferase.
  
  
 
0.814
SHG86537.1
Glutathione S-transferase.
  
  
  0.800
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.797
SHF92507.1
Hypothetical protein.
       0.768
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.