STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG09586.1Phosphatidylinositol alpha-1,6-mannosyltransferase. (385 aa)    
Predicted Functional Partners:
SHG09077.1
Hypothetical protein.
 
     0.796
SHG09057.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.754
SHG09560.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 
0.712
SHG09270.1
O-antigen ligase.
 
 
  0.709
SHG09030.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.681
SHH21429.1
Phosphatidylinositol alpha-mannosyltransferase.
  
     0.675
SHH21550.1
CDP-glucose 4,6-dehydratase.
 
 
  0.669
SHG32686.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.666
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.659
SHG05516.1
dTDP-glucose 4,6-dehydratase.
 
 
  0.645
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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