STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG10661.1Aminopeptidase N. (855 aa)    
Predicted Functional Partners:
SHG41926.1
2,4-dienoyl-CoA reductase (NADPH2).
    
 
 0.608
SHH08566.1
Aspartate aminotransferase.
   
 0.510
SHG62681.1
Cysteine desulfurase.
  
 
  0.490
SHH35664.1
Hypothetical protein.
  
  
  0.489
SHG10689.1
Hypothetical protein.
       0.481
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.481
SHG22510.1
PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation.
   
 0.473
SHF76147.1
Aspartate/methionine/tyrosine aminotransferase.
  
  
  0.470
SHG63198.1
Proton-dependent oligopeptide transporter, POT family.
  
 
 
 0.457
SHG66248.1
Glutamate carboxypeptidase.
    
 0.457
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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