Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF93850.1 | SHG12067.1 | SAMN05216361_0953 | SAMN05216361_1349 | LysM domain-containing protein. | Hypothetical protein. | 0.403 |
SHF93850.1 | SHG13911.1 | SAMN05216361_0953 | SAMN05216361_1423 | LysM domain-containing protein. | Peroxiredoxin, Ohr subfamily. | 0.536 |
SHF93850.1 | SHH18167.1 | SAMN05216361_0953 | SAMN05216361_3936 | LysM domain-containing protein. | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | 0.408 |
SHG02256.1 | SHG12067.1 | SAMN05216361_0985 | SAMN05216361_1349 | Putative serine protein kinase, PrkA. | Hypothetical protein. | 0.405 |
SHG02256.1 | SHG13911.1 | SAMN05216361_0985 | SAMN05216361_1423 | Putative serine protein kinase, PrkA. | Peroxiredoxin, Ohr subfamily. | 0.522 |
SHG12010.1 | SHG12038.1 | SAMN05216361_1347 | SAMN05216361_1348 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG12010.1 | SHG12067.1 | SAMN05216361_1347 | SAMN05216361_1349 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG12038.1 | SHG12010.1 | SAMN05216361_1348 | SAMN05216361_1347 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG12038.1 | SHG12067.1 | SAMN05216361_1348 | SAMN05216361_1349 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG12067.1 | SHF93850.1 | SAMN05216361_1349 | SAMN05216361_0953 | Hypothetical protein. | LysM domain-containing protein. | 0.403 |
SHG12067.1 | SHG02256.1 | SAMN05216361_1349 | SAMN05216361_0985 | Hypothetical protein. | Putative serine protein kinase, PrkA. | 0.405 |
SHG12067.1 | SHG12010.1 | SAMN05216361_1349 | SAMN05216361_1347 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG12067.1 | SHG12038.1 | SAMN05216361_1349 | SAMN05216361_1348 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG12067.1 | SHG13911.1 | SAMN05216361_1349 | SAMN05216361_1423 | Hypothetical protein. | Peroxiredoxin, Ohr subfamily. | 0.410 |
SHG12067.1 | SHH18167.1 | SAMN05216361_1349 | SAMN05216361_3936 | Hypothetical protein. | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | 0.446 |
SHG13911.1 | SHF93850.1 | SAMN05216361_1423 | SAMN05216361_0953 | Peroxiredoxin, Ohr subfamily. | LysM domain-containing protein. | 0.536 |
SHG13911.1 | SHG02256.1 | SAMN05216361_1423 | SAMN05216361_0985 | Peroxiredoxin, Ohr subfamily. | Putative serine protein kinase, PrkA. | 0.522 |
SHG13911.1 | SHG12067.1 | SAMN05216361_1423 | SAMN05216361_1349 | Peroxiredoxin, Ohr subfamily. | Hypothetical protein. | 0.410 |
SHG13911.1 | SHH18167.1 | SAMN05216361_1423 | SAMN05216361_3936 | Peroxiredoxin, Ohr subfamily. | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | 0.611 |
SHH18167.1 | SHF93850.1 | SAMN05216361_3936 | SAMN05216361_0953 | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | LysM domain-containing protein. | 0.408 |
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