STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG14868.1Polysaccharide pyruvyl transferase family protein WcaK. (393 aa)    
Predicted Functional Partners:
SHG14922.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.890
SHG14803.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.823
SHG14837.1
Oligosaccharide repeat unit polymerase.
       0.773
SHG14895.1
Hypothetical protein.
       0.773
SHG62876.1
UTP--glucose-1-phosphate uridylyltransferase.
    
  0.552
SHG09764.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.537
SHH21250.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.537
SHF72532.1
Glycosyl transferase family 2.
    
 0.468
SHG14604.1
Capsular exopolysaccharide family.
  
  
 0.455
SHH21103.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.455
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.