STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG16947.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (156 aa)    
Predicted Functional Partners:
SHG16973.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 0.999
SHG17002.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.999
SHG16921.1
Phospholipid transport system substrate-binding protein.
 0.998
SHG97078.1
ABC-type transporter Mla maintaining outer membrane lipid asymmetry, permease component MlaE.
 
 0.981
SHG16894.1
Phospholipid transport system transporter-binding protein.
  
 0.967
SHF87445.1
Anti-anti-sigma factor.
  
  0.909
SHH22504.1
Anti-anti-sigma factor.
  
  0.909
SHG63298.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.793
SHG59035.1
Chemotaxis protein MotB.
   
   0.780
SHG39288.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.775
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.