Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG03163.1 | SHG03189.1 | SAMN05216361_1020 | SAMN05216361_1021 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.986 |
SHG03163.1 | SHG03209.1 | SAMN05216361_1020 | SAMN05216361_1022 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.985 |
SHG03163.1 | SHG19002.1 | SAMN05216361_1020 | SAMN05216361_1603 | Biopolymer transport protein ExbD. | TonB family C-terminal domain-containing protein. | 0.841 |
SHG03163.1 | SHG19031.1 | SAMN05216361_1020 | SAMN05216361_1604 | Biopolymer transport protein ExbD. | Tetratricopeptide repeat-containing protein. | 0.556 |
SHG03163.1 | SHG19113.1 | SAMN05216361_1020 | SAMN05216361_1607 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.940 |
SHG03163.1 | SHG19144.1 | SAMN05216361_1020 | SAMN05216361_1608 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.941 |
SHG03163.1 | SHG19171.1 | SAMN05216361_1020 | SAMN05216361_1609 | Biopolymer transport protein ExbD. | Protein of unknown function. | 0.752 |
SHG03189.1 | SHG03163.1 | SAMN05216361_1021 | SAMN05216361_1020 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.986 |
SHG03189.1 | SHG03209.1 | SAMN05216361_1021 | SAMN05216361_1022 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbB. | 0.892 |
SHG03189.1 | SHG19002.1 | SAMN05216361_1021 | SAMN05216361_1603 | Biopolymer transport protein ExbB. | TonB family C-terminal domain-containing protein. | 0.902 |
SHG03189.1 | SHG19031.1 | SAMN05216361_1021 | SAMN05216361_1604 | Biopolymer transport protein ExbB. | Tetratricopeptide repeat-containing protein. | 0.750 |
SHG03189.1 | SHG19084.1 | SAMN05216361_1021 | SAMN05216361_1606 | Biopolymer transport protein ExbB. | Outer membrane transport energization protein ExbD. | 0.947 |
SHG03189.1 | SHG19144.1 | SAMN05216361_1021 | SAMN05216361_1608 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbB. | 0.533 |
SHG03189.1 | SHG19171.1 | SAMN05216361_1021 | SAMN05216361_1609 | Biopolymer transport protein ExbB. | Protein of unknown function. | 0.784 |
SHG03189.1 | SHH09911.1 | SAMN05216361_1021 | SAMN05216361_3769 | Biopolymer transport protein ExbB. | TonB-dependent receptor. | 0.404 |
SHG03209.1 | SHG03163.1 | SAMN05216361_1022 | SAMN05216361_1020 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbD. | 0.985 |
SHG03209.1 | SHG03189.1 | SAMN05216361_1022 | SAMN05216361_1021 | Biopolymer transport protein ExbB. | Biopolymer transport protein ExbB. | 0.892 |
SHG03209.1 | SHG19002.1 | SAMN05216361_1022 | SAMN05216361_1603 | Biopolymer transport protein ExbB. | TonB family C-terminal domain-containing protein. | 0.919 |
SHG03209.1 | SHG19031.1 | SAMN05216361_1022 | SAMN05216361_1604 | Biopolymer transport protein ExbB. | Tetratricopeptide repeat-containing protein. | 0.781 |
SHG03209.1 | SHG19084.1 | SAMN05216361_1022 | SAMN05216361_1606 | Biopolymer transport protein ExbB. | Outer membrane transport energization protein ExbD. | 0.941 |
page 1 of 4