Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG21152.1 | SHG22510.1 | SAMN05216361_1691 | SAMN05216361_1746 | Cysteine synthase A. | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | 0.782 |
SHG21152.1 | SHG71136.1 | SAMN05216361_1691 | SAMN05216361_2871 | Cysteine synthase A. | Cystathione beta-lyase. | 0.802 |
SHG21152.1 | SHH03945.1 | SAMN05216361_1691 | SAMN05216361_3554 | Cysteine synthase A. | Aminopeptidase N. | 0.776 |
SHG21152.1 | SHH08566.1 | SAMN05216361_1691 | SAMN05216361_3723 | Cysteine synthase A. | Aspartate aminotransferase. | 0.799 |
SHG21152.1 | glyA | SAMN05216361_1691 | SAMN05216361_2503 | Cysteine synthase A. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.544 |
SHG21152.1 | gshA | SAMN05216361_1691 | SAMN05216361_0995 | Cysteine synthase A. | Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.780 |
SHG21152.1 | pepA | SAMN05216361_1691 | SAMN05216361_2923 | Cysteine synthase A. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.698 |
SHG21152.1 | pepA-2 | SAMN05216361_1691 | SAMN05216361_3233 | Cysteine synthase A. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.698 |
SHG22510.1 | SHG21152.1 | SAMN05216361_1746 | SAMN05216361_1691 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Cysteine synthase A. | 0.782 |
SHG22510.1 | SHG71136.1 | SAMN05216361_1746 | SAMN05216361_2871 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Cystathione beta-lyase. | 0.786 |
SHG22510.1 | SHH03945.1 | SAMN05216361_1746 | SAMN05216361_3554 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Aminopeptidase N. | 0.854 |
SHG22510.1 | SHH07927.1 | SAMN05216361_1746 | SAMN05216361_3702 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.782 |
SHG22510.1 | SHH08566.1 | SAMN05216361_1746 | SAMN05216361_3723 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Aspartate aminotransferase. | 0.845 |
SHG22510.1 | glyA | SAMN05216361_1746 | SAMN05216361_2503 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.826 |
SHG22510.1 | gshA | SAMN05216361_1746 | SAMN05216361_0995 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.816 |
SHG22510.1 | gshB | SAMN05216361_1746 | SAMN05216361_2742 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.841 |
SHG22510.1 | pepA | SAMN05216361_1746 | SAMN05216361_2923 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.812 |
SHG22510.1 | pepA-2 | SAMN05216361_1746 | SAMN05216361_3233 | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.816 |
SHG71136.1 | SHG21152.1 | SAMN05216361_2871 | SAMN05216361_1691 | Cystathione beta-lyase. | Cysteine synthase A. | 0.802 |
SHG71136.1 | SHG22510.1 | SAMN05216361_2871 | SAMN05216361_1746 | Cystathione beta-lyase. | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | 0.786 |
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