Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF87919.1 | SHG36395.1 | SAMN05216361_0729 | SAMN05216361_1972 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | TIGR03643 family protein. | 0.641 |
SHG36366.1 | SHG36395.1 | SAMN05216361_1971 | SAMN05216361_1972 | Methyl-accepting chemotaxis protein. | TIGR03643 family protein. | 0.568 |
SHG36366.1 | SHG36424.1 | SAMN05216361_1971 | SAMN05216361_1973 | Methyl-accepting chemotaxis protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.439 |
SHG36395.1 | SHF87919.1 | SAMN05216361_1972 | SAMN05216361_0729 | TIGR03643 family protein. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.641 |
SHG36395.1 | SHG36366.1 | SAMN05216361_1972 | SAMN05216361_1971 | TIGR03643 family protein. | Methyl-accepting chemotaxis protein. | 0.568 |
SHG36395.1 | SHG36424.1 | SAMN05216361_1972 | SAMN05216361_1973 | TIGR03643 family protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.870 |
SHG36395.1 | SHG92634.1 | SAMN05216361_1972 | SAMN05216361_3345 | TIGR03643 family protein. | Haem-NO-binding. | 0.400 |
SHG36395.1 | SHH04408.1 | SAMN05216361_1972 | SAMN05216361_3570 | TIGR03643 family protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.625 |
SHG36395.1 | SHH04466.1 | SAMN05216361_1972 | SAMN05216361_3572 | TIGR03643 family protein. | Deoxyribodipyrimidine photolyase-related protein. | 0.511 |
SHG36424.1 | SHG36366.1 | SAMN05216361_1973 | SAMN05216361_1971 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Methyl-accepting chemotaxis protein. | 0.439 |
SHG36424.1 | SHG36395.1 | SAMN05216361_1973 | SAMN05216361_1972 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | TIGR03643 family protein. | 0.870 |
SHG36424.1 | SHH04466.1 | SAMN05216361_1973 | SAMN05216361_3572 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Deoxyribodipyrimidine photolyase-related protein. | 0.764 |
SHG92634.1 | SHG36395.1 | SAMN05216361_3345 | SAMN05216361_1972 | Haem-NO-binding. | TIGR03643 family protein. | 0.400 |
SHH04408.1 | SHG36395.1 | SAMN05216361_3570 | SAMN05216361_1972 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | TIGR03643 family protein. | 0.625 |
SHH04408.1 | SHH04466.1 | SAMN05216361_3570 | SAMN05216361_3572 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Deoxyribodipyrimidine photolyase-related protein. | 0.822 |
SHH04466.1 | SHG36395.1 | SAMN05216361_3572 | SAMN05216361_1972 | Deoxyribodipyrimidine photolyase-related protein. | TIGR03643 family protein. | 0.511 |
SHH04466.1 | SHG36424.1 | SAMN05216361_3572 | SAMN05216361_1973 | Deoxyribodipyrimidine photolyase-related protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.764 |
SHH04466.1 | SHH04408.1 | SAMN05216361_3572 | SAMN05216361_3570 | Deoxyribodipyrimidine photolyase-related protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.822 |