Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF91190.1 | SHG37044.1 | SAMN05216361_0853 | SAMN05216361_1993 | Polyphosphate kinase 2, PA0141 family. | Predicted RNA-binding protein, contains PUA-like domain. | 0.418 |
SHF91190.1 | SHG37136.1 | SAMN05216361_0853 | SAMN05216361_1996 | Polyphosphate kinase 2, PA0141 family. | Uncharacterized radical SAM protein YgiQ. | 0.743 |
SHF91190.1 | SHG37202.1 | SAMN05216361_0853 | SAMN05216361_1998 | Polyphosphate kinase 2, PA0141 family. | Hypothetical protein. | 0.862 |
SHF91190.1 | SHG92634.1 | SAMN05216361_0853 | SAMN05216361_3345 | Polyphosphate kinase 2, PA0141 family. | Haem-NO-binding. | 0.740 |
SHG37044.1 | SHF91190.1 | SAMN05216361_1993 | SAMN05216361_0853 | Predicted RNA-binding protein, contains PUA-like domain. | Polyphosphate kinase 2, PA0141 family. | 0.418 |
SHG37044.1 | SHG37073.1 | SAMN05216361_1993 | SAMN05216361_1994 | Predicted RNA-binding protein, contains PUA-like domain. | Thioredoxin 2. | 0.553 |
SHG37044.1 | SHG37136.1 | SAMN05216361_1993 | SAMN05216361_1996 | Predicted RNA-binding protein, contains PUA-like domain. | Uncharacterized radical SAM protein YgiQ. | 0.527 |
SHG37044.1 | SHG37202.1 | SAMN05216361_1993 | SAMN05216361_1998 | Predicted RNA-binding protein, contains PUA-like domain. | Hypothetical protein. | 0.457 |
SHG37044.1 | SHG92634.1 | SAMN05216361_1993 | SAMN05216361_3345 | Predicted RNA-binding protein, contains PUA-like domain. | Haem-NO-binding. | 0.412 |
SHG37073.1 | SHG37044.1 | SAMN05216361_1994 | SAMN05216361_1993 | Thioredoxin 2. | Predicted RNA-binding protein, contains PUA-like domain. | 0.553 |
SHG37136.1 | SHF91190.1 | SAMN05216361_1996 | SAMN05216361_0853 | Uncharacterized radical SAM protein YgiQ. | Polyphosphate kinase 2, PA0141 family. | 0.743 |
SHG37136.1 | SHG37044.1 | SAMN05216361_1996 | SAMN05216361_1993 | Uncharacterized radical SAM protein YgiQ. | Predicted RNA-binding protein, contains PUA-like domain. | 0.527 |
SHG37136.1 | SHG37202.1 | SAMN05216361_1996 | SAMN05216361_1998 | Uncharacterized radical SAM protein YgiQ. | Hypothetical protein. | 0.779 |
SHG37136.1 | SHG92634.1 | SAMN05216361_1996 | SAMN05216361_3345 | Uncharacterized radical SAM protein YgiQ. | Haem-NO-binding. | 0.957 |
SHG37202.1 | SHF91190.1 | SAMN05216361_1998 | SAMN05216361_0853 | Hypothetical protein. | Polyphosphate kinase 2, PA0141 family. | 0.862 |
SHG37202.1 | SHG37044.1 | SAMN05216361_1998 | SAMN05216361_1993 | Hypothetical protein. | Predicted RNA-binding protein, contains PUA-like domain. | 0.457 |
SHG37202.1 | SHG37136.1 | SAMN05216361_1998 | SAMN05216361_1996 | Hypothetical protein. | Uncharacterized radical SAM protein YgiQ. | 0.779 |
SHG37202.1 | SHG92634.1 | SAMN05216361_1998 | SAMN05216361_3345 | Hypothetical protein. | Haem-NO-binding. | 0.420 |
SHG92634.1 | SHF91190.1 | SAMN05216361_3345 | SAMN05216361_0853 | Haem-NO-binding. | Polyphosphate kinase 2, PA0141 family. | 0.740 |
SHG92634.1 | SHG37044.1 | SAMN05216361_3345 | SAMN05216361_1993 | Haem-NO-binding. | Predicted RNA-binding protein, contains PUA-like domain. | 0.412 |
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