Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHF87470.1 | SHG04474.1 | SAMN05216361_0712 | SAMN05216361_1070 | Serine phosphatase RsbU, regulator of sigma subunit. | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.684 |
| SHF87470.1 | SHG12254.1 | SAMN05216361_0712 | SAMN05216361_1356 | Serine phosphatase RsbU, regulator of sigma subunit. | Chemotaxis protein CheY-P-specific phosphatase CheC. | 0.874 |
| SHF87470.1 | SHG22713.1 | SAMN05216361_0712 | SAMN05216361_1754 | Serine phosphatase RsbU, regulator of sigma subunit. | PAS domain S-box-containing protein. | 0.998 |
| SHF87470.1 | SHG37364.1 | SAMN05216361_0712 | SAMN05216361_2003 | Serine phosphatase RsbU, regulator of sigma subunit. | Response regulator receiver domain-containing protein. | 0.818 |
| SHF87470.1 | SHG41175.1 | SAMN05216361_0712 | SAMN05216361_2149 | Serine phosphatase RsbU, regulator of sigma subunit. | ABC-type amino acid transport substrate-binding protein. | 0.990 |
| SHF87470.1 | SHG41453.1 | SAMN05216361_0712 | SAMN05216361_2161 | Serine phosphatase RsbU, regulator of sigma subunit. | Pilus assembly protein FimV. | 0.795 |
| SHF87470.1 | SHG43833.1 | SAMN05216361_0712 | SAMN05216361_2249 | Serine phosphatase RsbU, regulator of sigma subunit. | Signal transduction histidine kinase. | 0.999 |
| SHF87470.1 | SHG67835.1 | SAMN05216361_0712 | SAMN05216361_2768 | Serine phosphatase RsbU, regulator of sigma subunit. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.991 |
| SHF87470.1 | SHG71404.1 | SAMN05216361_0712 | SAMN05216361_2878 | Serine phosphatase RsbU, regulator of sigma subunit. | Hpt domain-containing protein. | 0.863 |
| SHF87470.1 | SHH34587.1 | SAMN05216361_0712 | SAMN05216361_4336 | Serine phosphatase RsbU, regulator of sigma subunit. | Signal transduction histidine kinase. | 0.984 |
| SHG04474.1 | SHF87470.1 | SAMN05216361_1070 | SAMN05216361_0712 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.684 |
| SHG04474.1 | SHG12254.1 | SAMN05216361_1070 | SAMN05216361_1356 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Chemotaxis protein CheY-P-specific phosphatase CheC. | 0.853 |
| SHG04474.1 | SHG22713.1 | SAMN05216361_1070 | SAMN05216361_1754 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | PAS domain S-box-containing protein. | 0.889 |
| SHG04474.1 | SHG37364.1 | SAMN05216361_1070 | SAMN05216361_2003 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Response regulator receiver domain-containing protein. | 0.851 |
| SHG04474.1 | SHG41175.1 | SAMN05216361_1070 | SAMN05216361_2149 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | ABC-type amino acid transport substrate-binding protein. | 0.911 |
| SHG04474.1 | SHG43833.1 | SAMN05216361_1070 | SAMN05216361_2249 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Signal transduction histidine kinase. | 0.974 |
| SHG04474.1 | SHG67835.1 | SAMN05216361_1070 | SAMN05216361_2768 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.411 |
| SHG04474.1 | SHG71404.1 | SAMN05216361_1070 | SAMN05216361_2878 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Hpt domain-containing protein. | 0.952 |
| SHG12254.1 | SHF87470.1 | SAMN05216361_1356 | SAMN05216361_0712 | Chemotaxis protein CheY-P-specific phosphatase CheC. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.874 |
| SHG12254.1 | SHG04474.1 | SAMN05216361_1356 | SAMN05216361_1070 | Chemotaxis protein CheY-P-specific phosphatase CheC. | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.853 |
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