STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG38715.1Isoquinoline 1-oxidoreductase, alpha subunit. (149 aa)    
Predicted Functional Partners:
SHG38737.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.999
SHG75086.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.995
SHH19328.1
Xanthine dehydrogenase large subunit.
 
  
  0.970
SHG36324.1
Xanthine dehydrogenase accessory factor.
 
 
 0.877
SHH07822.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.848
SHH19357.1
Xanthine dehydrogenase accessory factor.
 
 
 0.751
SHG11681.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.673
SHG47509.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
 
 0.605
SHG72625.1
FAD binding domain-containing protein.
  
 
 0.605
SHH19307.1
Xanthine dehydrogenase small subunit.
 
  
 
0.539
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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