STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG41999.1Adenylate cyclase, class 1. (656 aa)    
Predicted Functional Partners:
SHH36393.1
Icc protein.
  
  
 0.865
SHG35222.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.815
SHG17920.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.812
SHG87519.1
(p)ppGpp synthetase, RelA/SpoT family; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.812
SHG92357.1
Adenylate cyclase.
     
 0.809
SHG35777.1
Adenylate and Guanylate cyclase catalytic domain-containing protein.
     
 0.794
SHH35787.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
  
  
  0.728
SHG50925.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
    
  0.703
SHG22713.1
PAS domain S-box-containing protein.
  
  
 0.693
SHG48673.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
  
  0.680
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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