STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG67482.1Dipeptidyl-peptidase-4. (762 aa)    
Predicted Functional Partners:
SHG21299.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
     0.690
SHH24629.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
     0.599
SHH20235.1
PTS system, beta-glucosides-specific IIC component.
    
   0.585
SHG67449.1
Sel1 repeat-containing protein.
       0.508
SHF71924.1
Prolyl oligopeptidase family protein.
  
     0.498
SHG19699.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
  
     0.497
SHF93216.1
Zinc carboxypeptidase.
  
     0.484
SHH28994.1
TonB-dependent Receptor Plug Domain.
  
     0.482
SHF91503.1
Aminopeptidase N.
  
     0.441
SHG33376.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
  0.427
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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