STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG72177.1Enterochelin esterase. (532 aa)    
Predicted Functional Partners:
SHF83818.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.602
SHG31191.1
Endo-1,4-beta-xylanase, GH35 family.
   
   0.599
SHH09535.1
Endo-1,4-beta-xylanase.
   
   0.599
SHG45604.1
Esterase PHB depolymerase.
   
   0.584
SHG71723.1
Esterase, PHB depolymerase family.
   
   0.584
SHH02788.1
AAA domain-containing protein.
  
     0.554
SHG46515.1
Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
  
  
 0.548
SHG72144.1
Hypothetical protein.
       0.538
SHG46125.1
Gluconate 2-dehydrogenase subunit 3.
  
  
  0.534
SHG91563.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
 
  
 0.528
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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