STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG84935.1Z1 domain-containing protein. (725 aa)    
Predicted Functional Partners:
SHG33664.1
Diacylglycerol kinase family enzyme.
    
 0.961
SHG30909.1
EF-hand domain pair.
   
 0.941
SHG41573.1
Ankyrin repeat.
   
 0.899
SHH17837.1
Ankyrin repeat-containing protein.
   
 0.899
SHH20160.1
Ankyrin repeat.
   
 0.899
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.882
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
    
 0.848
SHG88631.1
DnaJ domain-containing protein.
    
 0.848
SHG31002.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
    
 0.796
SHH05351.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
    
 0.796
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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