STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG86757.1Uncharacterized conserved protein GlcG, DUF336 family. (141 aa)    
Predicted Functional Partners:
SHG86735.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
     0.848
SHG86781.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
 
     0.843
SHG86804.1
Imidazolonepropionase.
 
     0.832
SHG86710.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
       0.728
SHG86687.1
Acetyl esterase/lipase.
       0.724
SHG35895.1
FAD/FMN-containing dehydrogenase.
  
  
 0.628
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
  
 0.589
SHG70187.1
Adenosylcobinamide-phosphate synthase.
     
 0.541
SHG86825.1
LysR family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family.
       0.528
SHG86660.1
Hypothetical protein.
       0.469
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.