Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG20560.1 | SHG31668.1 | SAMN05216361_1667 | SAMN05216361_1805 | Hypothetical protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.663 |
SHG20560.1 | SHG41598.1 | SAMN05216361_1667 | SAMN05216361_2167 | Hypothetical protein. | TolB amino-terminal domain-containing protein. | 0.467 |
SHG20560.1 | SHG41622.1 | SAMN05216361_1667 | SAMN05216361_2168 | Hypothetical protein. | TolB amino-terminal domain-containing protein. | 0.513 |
SHG20560.1 | SHG87091.1 | SAMN05216361_1667 | SAMN05216361_3168 | Hypothetical protein. | Hypothetical protein. | 0.647 |
SHG20560.1 | SHG87113.1 | SAMN05216361_1667 | SAMN05216361_3169 | Hypothetical protein. | Putative membrane protein. | 0.711 |
SHG20560.1 | SHH28066.1 | SAMN05216361_1667 | SAMN05216361_4179 | Hypothetical protein. | Hypothetical protein. | 0.464 |
SHG31668.1 | SHG20560.1 | SAMN05216361_1805 | SAMN05216361_1667 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Hypothetical protein. | 0.663 |
SHG31668.1 | SHG41598.1 | SAMN05216361_1805 | SAMN05216361_2167 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | TolB amino-terminal domain-containing protein. | 0.546 |
SHG31668.1 | SHG41622.1 | SAMN05216361_1805 | SAMN05216361_2168 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | TolB amino-terminal domain-containing protein. | 0.606 |
SHG31668.1 | SHG87091.1 | SAMN05216361_1805 | SAMN05216361_3168 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Hypothetical protein. | 0.503 |
SHG31668.1 | SHG87113.1 | SAMN05216361_1805 | SAMN05216361_3169 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Putative membrane protein. | 0.598 |
SHG31668.1 | SHH22281.1 | SAMN05216361_1805 | SAMN05216361_4075 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Two-component system, NtrC family, sensor histidine kinase GlrK. | 0.833 |
SHG31668.1 | SHH28066.1 | SAMN05216361_1805 | SAMN05216361_4179 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Hypothetical protein. | 0.795 |
SHG41598.1 | SHG20560.1 | SAMN05216361_2167 | SAMN05216361_1667 | TolB amino-terminal domain-containing protein. | Hypothetical protein. | 0.467 |
SHG41598.1 | SHG31668.1 | SAMN05216361_2167 | SAMN05216361_1805 | TolB amino-terminal domain-containing protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.546 |
SHG41598.1 | SHG41622.1 | SAMN05216361_2167 | SAMN05216361_2168 | TolB amino-terminal domain-containing protein. | TolB amino-terminal domain-containing protein. | 0.829 |
SHG41598.1 | SHG87091.1 | SAMN05216361_2167 | SAMN05216361_3168 | TolB amino-terminal domain-containing protein. | Hypothetical protein. | 0.563 |
SHG41598.1 | SHG87113.1 | SAMN05216361_2167 | SAMN05216361_3169 | TolB amino-terminal domain-containing protein. | Putative membrane protein. | 0.664 |
SHG41598.1 | SHH28066.1 | SAMN05216361_2167 | SAMN05216361_4179 | TolB amino-terminal domain-containing protein. | Hypothetical protein. | 0.548 |
SHG41622.1 | SHG20560.1 | SAMN05216361_2168 | SAMN05216361_1667 | TolB amino-terminal domain-containing protein. | Hypothetical protein. | 0.513 |
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