STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH05243.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
SHH05333.1
Hypothetical protein.
 
   
 0.935
SHH05306.1
Cytochrome oxidase maturation protein, cbb3-type.
 
     0.934
SHH05281.1
Cu2+-exporting ATPase.
 
  
 0.914
SHH05214.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
    0.891
SHH05188.1
Cytochrome c oxidase cbb3-type subunit 4.
 
     0.861
SHH05156.1
Cytochrome c oxidase cbb3-type subunit 2.
 
    0.805
SHG20090.1
Cytochrome c oxidase accessory protein FixG.
 
    0.773
SHH05351.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
 
     0.760
SHH05129.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.756
SHF76322.1
Cytochrome c oxidase accessory protein FixG.
 
    0.706
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.