STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH11747.1Beta-aspartyl-peptidase (threonine type). (335 aa)    
Predicted Functional Partners:
SHG34525.1
L-asparaginase.
     
 0.802
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.797
SHH24655.1
Asparagine synthase (glutamine-hydrolysing).
     
 0.788
SHH08566.1
Aspartate aminotransferase.
   
 0.787
SHG22739.1
Glutamate decarboxylase.
     
 0.779
SHG67741.1
Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
     
 0.769
SHG92436.1
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
  0.769
SHG18630.1
Aspartate kinase; Belongs to the aspartokinase family.
     
 0.759
SHG09124.1
Asparagine synthase (glutamine-hydrolysing).
     
 0.748
SHG15182.1
Asparagine synthetase B (glutamine-hydrolyzing).
     
 0.748
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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