STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH19032.1Allantoate deiminase. (410 aa)    
Predicted Functional Partners:
SHH19003.1
(S)-ureidoglycine-glyoxylate aminotransferase.
 
 
  0.979
SHH18929.1
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family.
 
   
 0.926
SHH18954.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
 
  
 0.891
SHH19247.1
Putative urate catabolism protein.
 
  
 0.856
SHH03691.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
 
 
  0.825
SHH18899.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
 
     0.795
SHH18979.1
Uncharacterized membrane protein YfcA.
       0.781
SHG35895.1
FAD/FMN-containing dehydrogenase.
   
 0.761
SHH19053.1
Protein of unknown function.
       0.741
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.695
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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