Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG06307.1 | SHG91907.1 | SAMN05216361_1140 | SAMN05216361_3325 | Flagellar protein FlgJ. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.438 |
| SHG06307.1 | SHH20334.1 | SAMN05216361_1140 | SAMN05216361_4011 | Flagellar protein FlgJ. | LD-carboxypeptidase LdcB, LAS superfamily. | 0.478 |
| SHG34298.1 | SHG91907.1 | SAMN05216361_1898 | SAMN05216361_3325 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.678 |
| SHG34298.1 | SHH20334.1 | SAMN05216361_1898 | SAMN05216361_4011 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | LD-carboxypeptidase LdcB, LAS superfamily. | 0.604 |
| SHG34298.1 | ftsI | SAMN05216361_1898 | SAMN05216361_2707 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.656 |
| SHG34298.1 | mrdA | SAMN05216361_1898 | SAMN05216361_1895 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.931 |
| SHG91907.1 | SHG06307.1 | SAMN05216361_3325 | SAMN05216361_1140 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Flagellar protein FlgJ. | 0.438 |
| SHG91907.1 | SHG34298.1 | SAMN05216361_3325 | SAMN05216361_1898 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. | 0.678 |
| SHG91907.1 | SHG96717.1 | SAMN05216361_3325 | SAMN05216361_3465 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.532 |
| SHG91907.1 | SHH20334.1 | SAMN05216361_3325 | SAMN05216361_4011 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | LD-carboxypeptidase LdcB, LAS superfamily. | 0.579 |
| SHG91907.1 | ftsI | SAMN05216361_3325 | SAMN05216361_2707 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.945 |
| SHG91907.1 | mrdA | SAMN05216361_3325 | SAMN05216361_1895 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.928 |
| SHG96717.1 | SHG91907.1 | SAMN05216361_3465 | SAMN05216361_3325 | Diguanylate cyclase (GGDEF) domain-containing protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.532 |
| SHG96717.1 | SHH20334.1 | SAMN05216361_3465 | SAMN05216361_4011 | Diguanylate cyclase (GGDEF) domain-containing protein. | LD-carboxypeptidase LdcB, LAS superfamily. | 0.450 |
| SHH20235.1 | SHH20262.1 | SAMN05216361_4008 | SAMN05216361_4009 | PTS system, beta-glucosides-specific IIC component. | Transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family. | 0.559 |
| SHH20235.1 | SHH20334.1 | SAMN05216361_4008 | SAMN05216361_4011 | PTS system, beta-glucosides-specific IIC component. | LD-carboxypeptidase LdcB, LAS superfamily. | 0.555 |
| SHH20235.1 | SHH20368.1 | SAMN05216361_4008 | SAMN05216361_4012 | PTS system, beta-glucosides-specific IIC component. | Protein of unknown function. | 0.493 |
| SHH20235.1 | dapE | SAMN05216361_4008 | SAMN05216361_4010 | PTS system, beta-glucosides-specific IIC component. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.521 |
| SHH20262.1 | SHH20235.1 | SAMN05216361_4009 | SAMN05216361_4008 | Transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family. | PTS system, beta-glucosides-specific IIC component. | 0.559 |
| SHH20262.1 | SHH20334.1 | SAMN05216361_4009 | SAMN05216361_4011 | Transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family. | LD-carboxypeptidase LdcB, LAS superfamily. | 0.805 |
page 1 of 3