STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH23366.1Conserved hypothetical protein. (272 aa)    
Predicted Functional Partners:
SHG43833.1
Signal transduction histidine kinase.
   
 0.786
SHG22835.1
Signal transduction histidine kinase.
   
 0.692
SHG41175.1
ABC-type amino acid transport substrate-binding protein.
 
 
 0.692
SHG68698.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
   
 0.692
SHG92553.1
Two-component system, NarL family, sensor histidine kinase BarA.
   
 0.692
SHH22630.1
Chorismate mutase.
    
 0.689
SHG22713.1
PAS domain S-box-containing protein.
   
 0.657
SHH22598.1
Chorismate mutase.
     
 0.655
SHG45701.1
Signal transduction histidine kinase.
   
 0.652
SHG20512.1
Hypothetical protein.
  
     0.650
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.