Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG16010.1 | SHG22713.1 | SAMN05216361_1495 | SAMN05216361_1754 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SHG16010.1 | SHG22835.1 | SAMN05216361_1495 | SAMN05216361_1759 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.998 |
SHG16010.1 | SHG39098.1 | SAMN05216361_1495 | SAMN05216361_2065 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHG16010.1 | SHG41175.1 | SAMN05216361_1495 | SAMN05216361_2149 | PAS domain S-box-containing protein. | ABC-type amino acid transport substrate-binding protein. | 0.998 |
SHG16010.1 | SHG43833.1 | SAMN05216361_1495 | SAMN05216361_2249 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHG16010.1 | SHG45701.1 | SAMN05216361_1495 | SAMN05216361_2307 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.998 |
SHG16010.1 | SHG68698.1 | SAMN05216361_1495 | SAMN05216361_2794 | PAS domain S-box-containing protein. | Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB. | 0.998 |
SHG16010.1 | SHG92553.1 | SAMN05216361_1495 | SAMN05216361_3343 | PAS domain S-box-containing protein. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.998 |
SHG16010.1 | SHH28462.1 | SAMN05216361_1495 | SAMN05216361_4192 | PAS domain S-box-containing protein. | Na+/proline symporter. | 0.998 |
SHG16010.1 | SHH34587.1 | SAMN05216361_1495 | SAMN05216361_4336 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.998 |
SHG22713.1 | SHG16010.1 | SAMN05216361_1754 | SAMN05216361_1495 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SHG22713.1 | SHG22835.1 | SAMN05216361_1754 | SAMN05216361_1759 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHG22713.1 | SHG39098.1 | SAMN05216361_1754 | SAMN05216361_2065 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHG22713.1 | SHG41175.1 | SAMN05216361_1754 | SAMN05216361_2149 | PAS domain S-box-containing protein. | ABC-type amino acid transport substrate-binding protein. | 0.998 |
SHG22713.1 | SHG43833.1 | SAMN05216361_1754 | SAMN05216361_2249 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHG22713.1 | SHG45701.1 | SAMN05216361_1754 | SAMN05216361_2307 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SHG22713.1 | SHG68698.1 | SAMN05216361_1754 | SAMN05216361_2794 | PAS domain S-box-containing protein. | Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB. | 0.999 |
SHG22713.1 | SHG92553.1 | SAMN05216361_1754 | SAMN05216361_3343 | PAS domain S-box-containing protein. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.999 |
SHG22713.1 | SHH28462.1 | SAMN05216361_1754 | SAMN05216361_4192 | PAS domain S-box-containing protein. | Na+/proline symporter. | 0.998 |
SHG22713.1 | SHH34587.1 | SAMN05216361_1754 | SAMN05216361_4336 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
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