STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrB-3Multidrug efflux pump acriflavin resistance protein AcrB/AcrD/AcrF; Resistance-nodulation-division (RND) superfamily; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1057 aa)    
Predicted Functional Partners:
acrB-4
Multidrug efflux pump acriflavin resistance protein AcrB/AcrD/AcrF; Resistance-nodulation-division (RND) superfamily; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.970
nodT-3
Secretion system type I outer membrane efflux pump lipoprotein NodT; Resistance-nodulation-division (RND) superfamily.
 
 0.908
acrB-7
Multidrug efflux pump acriflavin resistance protein AcrB/AcrD/AcrF; Resistance-nodulation-division (RND) superfamily; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.782
czcB/hlyD
Heavy metal/cation efflux pump CzcB/HlyD; Major facilitator superfamily (MFS); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.579
BAH99066.1
Two component sensor histidine kinase.
  
   0.549
rmuC
DNA recombinase RmuC.
       0.528
kdpE
Two component response regulator KdpE; Winged helix family.
     
 0.528
rplA
LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
  
    0.522
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
       0.519
nodT-4
Secretion system type I outer membrane efflux pump lipoprotein NodT; Resistance-nodulation-division (RND) superfamily.
 
 0.506
Your Current Organism:
Acetobacter pasteurianus
NCBI taxonomy Id: 634452
Other names: A. pasteurianus IFO 3283-01, Acetobacter pasteurianus IFO 3283-01
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