STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH99665.1TonB-dependent receptor. (786 aa)    
Predicted Functional Partners:
BAH99735.1
Hypothetical protein.
  
     0.731
oprB-3
Porin B carbohydrate-selective OprB.
  
     0.695
BAI00744.1
Outer membrane protein; Adhesin family protein.
  
 
 
 0.675
BAH99653.1
Acid phosphatase precursor.
  
     0.668
BAH99654.1
Ribonuclease I; Belongs to the RNase T2 family.
  
     0.657
BAH99599.1
Hypothetical protein.
  
     0.656
BAH98713.1
TonB-dependent receptor.
  
     0.642
BAI00352.1
Sorbitol dehydrogenase small subunit.
  
     0.593
BAH98697.1
Aminoglycoside phospho transferase.
  
     0.584
BAH99604.1
Na+/H+ antiporter.
  
     0.577
Your Current Organism:
Acetobacter pasteurianus
NCBI taxonomy Id: 634452
Other names: A. pasteurianus IFO 3283-01, Acetobacter pasteurianus IFO 3283-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.